PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000228304
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family WRKY
Protein Properties Length: 362aa    MW: 40817.7 Da    PI: 6.8433
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000228304genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.67.9e-11171247259
                    --SS-EEEEEEE-..............-TT-S..S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKe..............vkgse..fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dg +WrKYGqK+              ++++      +Y+rCt +   gC+++k+v++ +++p++ +itY geH+++
  MDP0000228304 171 EDGQAWRKYGQKDnpqsfisknqiwmcIEKNSvaIQGAYFRCTRKydqGCKATKQVQQIQDNPRTYQITYIGEHTCR 247
                    89**********74444422222222222222113458*****998899**************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.4E-16159247IPR003657WRKY domain
SuperFamilySSF1182902.62E-13168247IPR003657WRKY domain
SMARTSM007745.2E-23170248IPR003657WRKY domain
PROSITE profilePS5081111.543170244IPR003657WRKY domain
PfamPF031066.3E-12171247IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MSERIAQSKI SPVKVKILES SVCVRERTEE LRLGTEQKQS IVERMGTNHK RLIEELLEGR  60
KTAVELQSLL HKPFGDRESA EELLMKIMTT FTESLSVLTA SNGHEDHQSA ASGEVYQVKP  120
EPSHVEHSHC GDRSSEGSGE SPKTQAFKDR RGSYKRRKTS QSWKVISTKI EDGQAWRKYG  180
QKDNPQSFIS KNQIWMCIEK NSVAIQGAYF RCTRKYDQGC KATKQVQQIQ DNPRTYQITY  240
IGEHTCRTMI KASPMIIGPD LWPSQTVSSE SGSPHRQNPN FFGSSSSSIP IVKQEDSKVG  300
TPSDVTDNNV WLGLKDHLDF SEPTGICVSS NENVVSNMQW DDMVKSINFE CDINFDEGFD  360
AV
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.237680.0fruit| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008369379.10.0PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 70
TrEMBLM5XHJ01e-124M5XHJ0_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-31WRKY DNA-binding protein 70